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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015864749.1_cds_XP_016516102.1_28380
CDS Infomation

[gene=LOC107832742] [db_xref=GeneID:107832742] [protein=gamma aminobutyrate transaminase 3, chloroplastic-like isoform X2] [protein_id=XP_016516102.1] [location=join(9183..9236,12369..12502,12861..12945,13022..13094,13185..13282,13374..13466,13620..13693,13799..13837,13914..14002,14087..14152,14257..14327,14628..14759,14845..14932,15028..15106,15415..15505,15597..15675,15765..15880,16236..16310)] [gbkey=CDS]
Sequence

ATGGCAAAGATTACTAGTCTAATTGGATCTGGGATCATAGCAGCCACTAACCAGGTCGGT
TCCCGTGTAAAGCATATTCCTGTTGTTAGCAATTTGCAGAAACAAATCGTTTGCGATCCT
AAACAGATTAGATGGAGTAGCACTGAAACATCTTTGAAGAATGATATTTCATCAGCTGAC
ATTAGAGGATATAAGGGACATGATATGTTGGCACCCTTCACTGCCGGGTGGCAGACTACT
GATGTGGATCCTTTAGTCATACAAAAGTCCGAGGGTTCTTATGTTTATGACATAAATGGG
AAGAAGTATCTTGATGCTCTAGCTGGTTTGTGGTGCACAGCTTTAGGGGGAAATGAGCCT
CGTCTTGTTGCCGCTGCAACTAAACAACTCAATCAGTTGCCCTTTTACCATTCGTTTTGG
AATCGTACCACAAAGCCTTCTTTGGATCTGGCAACAGAACTCCTGGATTTGTTTACTGCA
AATAAAATGGCGAAAGCTTTCTTCACAAATAGCGGATCAGAAGCTAATGACACTCAGGTG
AAGCTGGTATGGTATTACAACAATGCGCTTGGGAGGCCAGATAAAAAGAAATTTATTGCT
CGAATAAAATCATACCATGGATCTACTCTCATTTCCGCCAGTCTCTCTGGTCTTCCTGCA
TTACATCAGAAATTTGATTTGCCGGCTCCATTTGTTCTGCACACTGACTGCCCTCATTAT
TGGCGCTATCATTTGCCAGGTGAGACGGAAGAGGAGTTCTCGACAAGATTGGCCAATAAT
TTGGAAAATCTTATACTCAAAGAGGCTGCTTTCATTGCCGAACCAGTCATGGGGGCAGGA
GGTGTCATACCTCCTCCGGCAACCTATTTCGATAAGATCCAAGCTATAGTCAAGAAGTAT
GACATTCTTTTCATTGCGGATGAGGTTATATGTGGATTTGGAAGGCTTGGGACAACGTTC
GGCTGTGAAAAATACAACATTAAACCTGATCTTGTCTCTGTAGCAAAGGCTCTTTCTTCT
GGATATATGCCAATCGGCGCAGTCCTTGTAAGCCCTGAAGTTTCTGATGTCATAAATTCT
CAAAGCAACAAACTTGGTACATTTTCACATGGATTTACTTACTCCGGGCACCCTGTCTCG
TGTGTGGTTGCCTTGGAAACACTCAAGATATACAAGGAAAGAAATATTATCGAGCAAGTA
AACAGAATATCACCAAAGTTCCAAGAAGGTTTGAAAGCATTCTCTGATAGTCCCATAGTC
GGGGAGACAAGGGGAACTGGTTTGCTACATGGTACAGAGTTTACAGATAACAAATCTCCG
AACGATCCTTTTCCACCTGAATGGGGTATTGGTGCATATTTTGGAGCACAGTGTGAGAAG
TACGGGATGTTAGTACGTGTTGCTGGTGATAACATAATGATGTCTCCTCCATATATTTTG
AGTTTAAAAGAAATTGATGAGTTGATAGTCAAATATGGGAAAGCACTTAAGGATACTGAA
AAGAGAGTTGAAGAACTCAAGTCCCAGAACAAGTAA

Peptide Sequence

PEP ID

XP_016516102.1
PEP Infomation

PREDICTED: gamma aminobutyrate transaminase 3, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MAKITSLIGSGIIAATNQVGSRVKHIPVVSNLQKQIVCDPKQIRWSSTETSLKNDISSAD
IRGYKGHDMLAPFTAGWQTTDVDPLVIQKSEGSYVYDINGKKYLDALAGLWCTALGGNEP
RLVAAATKQLNQLPFYHSFWNRTTKPSLDLATELLDLFTANKMAKAFFTNSGSEANDTQV
KLVWYYNNALGRPDKKKFIARIKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHY
WRYHLPGETEEEFSTRLANNLENLILKEAAFIAEPVMGAGGVIPPPATYFDKIQAIVKKY
DILFIADEVICGFGRLGTTFGCEKYNIKPDLVSVAKALSSGYMPIGAVLVSPEVSDVINS
QSNKLGTFSHGFTYSGHPVSCVVALETLKIYKERNIIEQVNRISPKFQEGLKAFSDSPIV
GETRGTGLLHGTEFTDNKSPNDPFPPEWGIGAYFGAQCEKYGMLVRVAGDNIMMSPPYIL
SLKEIDELIVKYGKALKDTEKRVEELKSQNK

Transcript Sequence

Gene sequence data has not been registered.